Job Description A0AV96 Confidence 99.67% Date Fri May 25 09:48:37 BST 2012 Rank 159 Aligned Residues 82 % Identity 18% Template d2k3ka1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	.	.	.	.	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.																.	.																																	.
Template Conservation																																												.	.																																	.
Template Sequence		E	M	L	P	N	Q	T	I	Y	I	N	N	L	N	E	K	I	K	K	E	E	L	K	K	S	L	Y	A	I	F	S	Q	F	G	Q	I	L	D	I	V	A	L	.	.	K	T	L	K	M	R	G	Q	A	F	V	I	F	K	E	I	G	S	A	S	N	A	L	R	T	M	Q	G	F	P	F	Y	.	D	K	P
Template Known Secondary structure							S									T	T														G	G	G	G	T									.	.	S	S	G	G	G	T	S							S	S												T	T		B	S	S	.	S	S	B
Template Predicted Secondary structure																																												.	.																																	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.
		142	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	C	C	S	V	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Q	I	A	Y	S	K	S	D
Template Known Secondary structure							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions