Job Description A0AV96 Confidence 99.74% Date Fri May 25 09:48:37 BST 2012 Rank 71 Aligned Residues 80 % Identity 23% Template d2ghpa3 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.70

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		69	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		R	G	C	E	V	F	V	G	K	I	P	R	D	.	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S
Query Conservation															.
Alig confidence															.																										.																							.								.
Template Conservation																																									.																							.								.
Template Sequence		E	G	R	E	I	X	I	R	N	L	S	T	E	L	L	D	E	N	L	L	R	E	S	F	E	G	F	G	S	I	E	K	I	N	I	P	A	G	Q	.	K	F	N	N	C	C	A	F	X	V	F	E	N	K	D	S	A	E	R	A	L	Q	.	X	N	R	S	L	L	G	.	N	R	E	I	S	V	S	L	A
Template Known Secondary structure		T	T	T									T	T	T											G	G	G	S									S			.												S	S								G	G	.	G	T	T				T	.	T
Template Predicted Secondary structure																																									.																							.								.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.
		148	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	N	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	K	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions