Job Description A0AV96 Confidence 99.77% Date Fri May 25 09:48:37 BST 2012 Rank 38 Aligned Residues 112 % Identity 22% Template d2f9da1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.50

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C
Query Conservation
Alig confidence																																								.	.																																	.
Template Conservation																																								.	.																																	.
Template Sequence		P	P	E	V	N	R	I	L	Y	I	R	N	L	P	Y	K	I	T	A	E	E	M	Y	D	I	F	G	K	Y	G	P	I	R	Q	I	R	V	G	.	.	N	T	P	E	T	R	G	T	A	Y	V	V	Y	E	D	I	F	D	A	K	N	A	C	D	H	L	S	G	F	N	V	C	.	N	R	Y	L	V	V	L
Template Known Secondary structure			T	T			S						S			T	T												T	T	S									.	.		S	T	T	T	T	T							S	S												T	T				T	.	T
Template Predicted Secondary structure																																								.	.																																	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	V	D	N	C	R	L	F	I	G	G	I	P	K	M	K	K	R	E	E	I	L	E	E	I	A	K	V	T	E	G	V	L	D	V	I
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		Y	Y	N	A	N	R	.	.	A	F	Q	K	M	D	T	K	K	K	E	E	Q	L	K	L	L	K	E	K	Y	G	I	N	T	D	P	P	K
Template Known Secondary structure								.	.		T	T	T	S																					S
Template Predicted Secondary structure								.	.
Template SS confidence
		91	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions