Job Description A0AV96 Confidence 99.69% Date Fri May 25 09:48:37 BST 2012 Rank 136 Aligned Residues 80 % Identity 31% Template d2cpja1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S
Query Conservation
Alig confidence																																								.	.	.	.	.																												.
Template Conservation																																								.	.	.	.	.																												.
Template Sequence		T	Q	R	S	R	L	F	V	G	N	L	P	P	D	I	T	E	E	E	M	R	K	L	F	E	K	Y	G	K	A	G	E	V	F	I	H	K	D	.	.	.	.	.	K	G	F	G	F	I	R	L	E	T	R	T	L	A	E	I	A	K	V	E	L	D	N	M	P	L	R	.	G	K	Q	L	R	V	R	F	A
Template Known Secondary structure				T	T						S			T	T										T	S	T	T				S						T	T	.	.	.	.	.	T	T							S	S	S											T	T			B	T	.	T	B							S
Template Predicted Secondary structure																																								.	.	.	.	.																												.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.
		148	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	N	C	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	H	S	A	S	L
Template Known Secondary structure		S			S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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