Job Description A0AV96 Confidence 99.68% Date Fri May 25 09:48:37 BST 2012 Rank 151 Aligned Residues 76 % Identity 25% Template d2cpia1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																					.	.	.																				.		.	.	.
Query SS confidence																					.	.	.																				.		.	.	.
Query Sequence		R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	.	.	.	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	.	.	.	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L
Query Conservation																					.	.	.																				.		.	.	.
Alig confidence																					.	.	.																				.		.	.	.																															.
Template Conservation																																																																														.
Template Sequence		Q	K	N	L	V	F	V	V	G	L	S	Q	R	L	A	D	P	E	V	L	K	R	P	E	Y	F	G	K	F	G	K	I	H	K	V	V	I	N	N	S	T	S	Y	A	G	S	Q	G	P	S	A	S	A	Y	V	T	Y	I	R	S	E	D	A	L	R	A	I	Q	C	V	N	N	V	V	V	D	.	G	R	T
Template Known Secondary structure			S	S									T	T	T								S	T	T	T	T	T	T	T	S											S	S			S	S	S											S	S												T	T				T	.	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.
		142	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions