Job Description A0AV96 Confidence 99.69% Date Fri May 25 09:48:37 BST 2012 Rank 139 Aligned Residues 79 % Identity 24% Template d2cpfa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	.	.	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.																																.
Template Conservation																																																																							.
Template Sequence		L	F	I	K	N	L	N	F	S	T	T	E	E	T	L	K	G	V	F	S	K	V	G	A	I	K	S	C	T	I	S	K	K	K	N	K	A	G	V	L	L	S	M	G	F	G	F	V	E	Y	K	K	P	E	Q	A	Q	K	A	L	K	Q	L	Q	G	H	T	V	D	.	G	H	K	L	E	V	R	I	S	E
Template Known Secondary structure						S			T	T												T	T	S													T	T														S	S											S	T	T				T	.	T								S	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440
		149	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	T	K
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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