Job Description A0AV96 Confidence 99.74% Date Fri May 25 09:48:37 BST 2012 Rank 81 Aligned Residues 88 % Identity 23% Template d2cpea1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.									.
Query SS confidence																																						.	.	.	.	.	.	.	.									.
Query Sequence		E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	.	.	.	.	.	.	.	.	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N
Query Conservation																																						.	.	.	.	.	.	.	.									.
Alig confidence																																						.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		D	P	D	E	D	S	D	N	S	A	I	Y	V	Q	G	L	N	D	S	V	T	L	D	D	L	A	D	F	F	K	Q	C	G	V	V	K	M	N	K	R	T	G	Q	P	M	I	H	I	Y	L	D	K	E	T	G	K	P	K	G	D	A	T	V	S	Y	E	D	P	P	T	A	K	A	A	V	E	W	F	D	G
Template Known Secondary structure																			T	T											T	T	T	S		B		B		S	S	S			B	S					B		T	T	T		S	B		S						B	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D	N	C
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		K	D	F	Q	.	G	S	K	L	K	V	S	L	A	R	K	K	P
Template Known Secondary structure					T	.	T								S	S
Template Predicted Secondary structure						.
Template SS confidence
		433	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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