Job Description A0AV96 Confidence 99.73% Date Fri May 25 09:48:37 BST 2012 Rank 88 Aligned Residues 85 % Identity 69% Template d2cpda1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	D	V	M	E	T	V	K	I	L	Y	V	R	N	L	M	I	E	T	T	E	D	T	I	K	K	S	F	G	Q	F	N	P	G	C	V	E	R	V	K	K	I	R	D	Y	A	F	V	H	F	T	S	R	E	D	A	V	H	A	M	N	N	L	N	G	T	E	L	E	G	S	C	L	E	V	T	L	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	D	T	M	S	S	V	K	I	L	Y	V	R	N	L	M	L	S	T	S	E	E	M	I	E	K	E	F	N	N	I	K	P	G	A	V	E	R	V	K	K	I	R	D	Y	A	F	V	H	F	S	N	R	E	D	A	V	E	A	M	K	A	L	N	G	K	V	L	D	G	S	P	I	E	V	T	L	A	K
Template Known Secondary structure				S		S	S									S			T	T												T	T	S	T	T									S	S							S	S												S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		318	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	D	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	D	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions