Job Description A0AV96 Confidence 99.71% Date Fri May 25 09:48:37 BST 2012 Rank 117 Aligned Residues 78 % Identity 19% Template d2b0ga1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S
Query Conservation
Alig confidence																																									.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		P	P	N	Q	I	L	F	L	T	N	L	P	E	E	T	N	E	M	M	L	S	M	L	F	N	Q	F	P	G	F	K	E	V	R	L	V	P	N	R	.	.	.	.	H	D	I	A	F	V	E	F	T	T	E	L	Q	S	N	A	A	K	E	A	L	Q	G	F	K	I	T	P	T	H	A	M	K	I	T	F	A
Template Known Secondary structure		S			S						S			T	T											T	T	S	T	T								T	T	T	.	.	.	.		S							S	S												T	T		B	S	S	T	T		B
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		148	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		82	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions