Job Description A0AV96 Confidence 99.75% Date Fri May 25 09:48:37 BST 2012 Rank 60 Aligned Residues 95 % Identity 17% Template d1x5oa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	S	G	V	Q	A	Q	M	A	K	Q	Q	E	Q	D	P	T	N	L	Y	I	S	N	L	P	L	S	M	D	E	Q	E	L	E	N	M	L	K	P	F	G	Q	V	I	S	T	R	I	L	R	D	S	S	G	T	S	R	G	V	G	F	A	R	M	E	S	T	E	K	C	E	A	V	I	G	H	F	N	G
Template Known Secondary structure				S								S						T	T						S			T	T									T	T	T	T	T	S											S	S	S											S													B	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		K	F	I	K	.	T	P	P	G	V	S	A	P	T	E	P
Template Known Secondary structure						.			T	T	S				S	S
Template Predicted Secondary structure						.
Template SS confidence
		89	90	.	.		.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions