Job Description A0AV96 Confidence 99.64% Date Fri May 25 09:48:37 BST 2012 Rank 178 Aligned Residues 85 % Identity 19% Template d1x4da1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																																	.	.
Query SS confidence																					.																																																	.	.
Query Sequence		E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	.	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	.	.	E	L	N	N	Y	E	I	R	P	G
Query Conservation																					.																																																	.	.
Alig confidence																					.																									.	.	.	.	.																				.	.									.
Template Conservation																																														.	.	.	.	.																														.
Template Sequence		Q	K	G	R	V	E	T	R	R	V	V	H	I	M	D	F	Q	R	G	K	N	L	R	Y	Q	L	L	Q	L	V	E	P	F	G	V	I	S	N	H	L	I	L	N	K	.	.	.	.	.	I	N	E	A	F	I	E	M	A	T	T	E	D	A	Q	A	A	V	D	Y	Y	T	T	T	P	A	L	V	F	.	G
Template Known Secondary structure																S				S	S	S							T	T	T	G	G	G	S									S	S	.	.	.	.	.	S	S							S	S														S					T	.	T
Template Predicted Secondary structure																																														.	.	.	.	.																														.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	G	V	C	C	S	V	D	N	C	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	V	R	V	H	L	S	Q	K	Y	K	R	I
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions