Job Description A0AV96 Confidence 99.73% Date Fri May 25 09:48:37 BST 2012 Rank 85 Aligned Residues 89 % Identity 26% Template d1x4aa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R
Query Conservation
Alig confidence																																																		.	.																												.
Template Conservation																																																		.	.																												.
Template Sequence		V	I	R	G	P	A	G	N	N	D	C	R	I	Y	V	G	N	L	P	P	D	I	R	T	K	D	I	E	D	V	F	Y	K	Y	G	A	I	R	D	I	D	L	K	N	R	R	G	G	.	.	P	P	F	A	F	V	E	F	E	D	P	R	D	A	E	D	A	V	Y	G	R	D	G	Y	D	Y	D	.	G	Y
Template Known Secondary structure			S	S							S	S						S			T	T											G	G	G	S										S	S	S	S	.	.	S								S													T	T				T	.	T
Template Predicted Secondary structure																																																		.	.																												.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.
		141	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	V	C	C	S	V	D	N	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	R	V	E	F	P	R	S	G	R	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions