Job Description A0AV96 Confidence 99.76% Date Fri May 25 09:48:37 BST 2012 Rank 56 Aligned Residues 89 % Identity 26% Template d1whwa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L
Query Conservation																																														.
Alig confidence																																														.																																.
Template Conservation																																																																														.
Template Sequence		G	S	S	G	S	S	G	S	G	R	L	F	V	R	N	L	S	Y	T	S	S	E	E	D	L	E	K	L	F	S	A	Y	G	P	L	S	E	L	H	Y	P	I	D	S	L	T	K	K	P	K	G	F	A	F	V	T	F	M	F	P	E	H	A	V	K	A	Y	A	E	V	D	G	Q	V	F	Q	.	G	R	M
Template Known Secondary structure								S											T	T												T	T	S											T	T	T					S							S	S											T	T	T			S	S	.	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.
		142	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	C	C	S	V	D	N	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	V	L	P	S	T	I	K	K	E
Template Known Secondary structure											S	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions