Job Description A0AV96 Confidence 99.70% Date Fri May 25 09:48:37 BST 2012 Rank 122 Aligned Residues 91 % Identity 21% Template d1wexa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E
Query Conservation
Alig confidence																																																				.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		G	S	S	G	S	S	G	S	H	H	K	V	S	V	S	P	V	V	H	V	R	G	L	C	E	S	V	V	E	A	D	L	V	E	A	L	E	K	F	G	T	I	C	Y	V	M	M	M	P	F	.	.	.	.	.	K	R	Q	A	L	V	E	F	E	N	I	D	S	A	K	E	C	V	T	F	A	A	D	V	P
Template Known Secondary structure				S	S				S								S						S			S	S											T	T	T	S									T	T	.	.	.	.	.	T	T							S	S														S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		136	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		I	R	.	P	G	R	L	L	G	V	C	C	S	V	D	N	C
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		V	Y	I	A	G	Q	Q	A	F	F	N	Y	S	T	S	K	R
Template Known Secondary structure			B	S	S	S	S	B							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions