Job Description A0AV96 Confidence 97.49% Date Fri May 25 09:48:37 BST 2012 Rank 218 Aligned Residues 70 % Identity 9% Template d1uw4a_ SCOP info Ferredoxin-like RNA-binding domain, RBD Smg-4/UPF3 Resolution 1.95

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																						.								.	.
Query SS confidence																																						.								.	.
Query Sequence		C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	.	.	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R
Query Conservation																																						.								.	.
Alig confidence																																						.								.	.
Template Conservation
Template Sequence		S	K	V	V	I	R	R	L	P	P	T	L	T	K	E	Q	L	Q	E	H	L	Q	P	M	P	E	H	D	Y	F	E	F	F	S	N	D	T	S	L	Y	P	H	M	Y	A	R	A	Y	I	N	F	K	N	Q	E	D	I	I	L	F	R	D	R	F	D	G	Y	V	F	L	D	N	K
Template Known Secondary structure											T	T												S												S			S	S	T	T											S	S	S											T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions