Job Description A0AV96 Confidence 99.83% Date Fri May 25 09:48:37 BST 2012 Rank 19 Aligned Residues 98 % Identity 29% Template d1hl6a_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.5

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		Q	R	K	Y	G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		A	K	H	R	K	G	R	G	F	G	P	G	P	Q	R	S	V	E	G	W	I	L	F	V	T	S	I	H	E	E	A	Q	E	D	E	I	Q	E	K	F	C	D	Y	G	E	I	K	N	I	H	L	N	L	D	R	R	T	G	F	S	K	G	Y	A	L	V	E	Y	E	T	H	K	Q	A	L	A	A	K	E	A
Template Known Secondary structure							S	G	G	G				B			B	T	T	B							S			T	T												T	T	S									B		T	T	T		S	B		S							S	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D	N
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		L	N	G	A	E	I	M	.	G	Q	T	I	Q	V	D	W	C	F	V	K
Template Known Secondary structure			T	T				T	.	T								S		B
Template Predicted Secondary structure									.
Template SS confidence
		134	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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