Job Description A0AV96 Confidence 99.70% Date Fri May 25 09:48:37 BST 2012 Rank 130 Aligned Residues 82 % Identity 21% Template c4a8xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna-binding protein with serine-rich domain 1; PDBTitle: structure of the core asap complex Resolution 1.90 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C
Query Conservation																																								.	.
Alig confidence																																								.	.																																.
Template Conservation																																																																									.
Template Sequence		K	P	T	K	V	H	I	G	R	L	T	R	N	V	T	K	D	H	I	M	E	I	F	S	T	Y	G	K	I	K	M	I	D	M	P	V	E	R	M	H	P	H	L	S	K	G	Y	A	Y	V	E	F	E	N	P	D	E	A	E	K	A	L	K	H	M	D	G	G	Q	I	D	.	G	Q	E	I	T	A	T	A
Template Known Secondary structure													T	T												T	T	S											T	T							S							S	S												T	T				T	.	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.
		147	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	N	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A	P	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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