Job Description A0AV96 Confidence 85.31% Date Fri May 25 09:48:37 BST 2012 Rank 230 Aligned Residues 63 % Identity 8% Template c3trzE_ PDB info PDB header:rna binding protein/rna Chain: E: PDB Molecule:protein lin-28 homolog a; PDBTitle: mouse lin28a in complex with let-7d microrna pre-element Resolution 2.90 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.												.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	.	.	.	.	.	.	.	.	.	.	.	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D	N	C	R	L	F	I	G	G
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		Q	L	L	H	G	A	G	I	C	K	W	F	N	V	R	.	.	.	.	.	.	.	M	G	F	G	F	L	S	M	T	A	R	A	G	V	A	L	D	P	P	V	D	V	F	V	H	Q	S	K	L	H	M	E	G	F	R	S	L	K	E	G	E	A	V	E	F	T	F	K	K	S	A	K	G	L	E	S	I	R
Template Known Secondary structure			S												T	T	.	.	.	.	.	.	.	T	T										T	T													G	G	G	B			S	S	S					T	T											T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		158
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		109

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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