Job Description A0AV96 Confidence 99.53% Date Fri May 25 09:48:37 BST 2012 Rank 203 Aligned Residues 136 % Identity 23% Template c3thtB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:alkylated dna repair protein alkb homolog 8; PDBTitle: crystal structure and rna binding properties of the rrm/alkb domains2 in human abh8, an enzyme catalyzing trna hypermodification, northeast3 structural genomics consortium target hr5601b Resolution 3.01 Å

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		68	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.
Predicted Secondary structure												.	.																																																												.	.
Query SS confidence												.	.																																																												.	.
Query Sequence		Q	R	G	C	E	V	F	V	G	K	.	.	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	.	.	R	P	G	R	L	L	G
Query Conservation												.	.																																																												.	.
Alig confidence												.	.																													.	.	.	.	.																											.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		Y	A	T	Q	S	L	V	V	A	N	G	G	L	G	N	G	V	S	R	N	Q	L	L	P	V	L	E	K	C	G	L	V	D	A	L	L	M	P	P	N	.	.	.	.	.	K	P	Y	S	F	A	R	Y	R	T	T	E	E	S	K	R	A	Y	V	T	L	N	G	K	E	V	V	D	D	L	G	Q	K	I	T
Template Known Secondary structure		S			S						T		S	G	G	G	T												T	T	S									T	T	.	.	.	.	.		S							S	S											T	T	T						T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	C	S	V	D	N	C	R	L	F	I	G	G	I	P	K	M	K	K	R	E	E	I	L	E	E	I	A	K	V	T	E	G	V	L	D	V	I	V	Y	A	S	A	A	D	K	M	K	N	R	G	F	A	F	V	E	Y	E	S	H	R	A	A	A	M	A	R	R	K	L	M	P	G	R	I	Q	L	W	G
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	L	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	K	V	Q	W	K	E	L	R	P	Q	A	L	P	P	G	L	M	V	V	E	E	I	I	S	S	E	E	E	K	M	L	L	E	S	V	D	W	R	R	V	K	H	F	G
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S										S		S	T	T					T	T		S											T										S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.																														120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	I	A	V	D	W	A	E	P	E	I	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	F	N	V	D	K	D	K	P	L	S	G	G
Template Known Secondary structure		B							S	S		B		S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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