Job Description A0AV96 Confidence 99.19% Date Fri May 25 09:48:37 BST 2012 Rank 214 Aligned Residues 77 % Identity 14% Template c3s6eB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:rna-binding protein 39; PDBTitle: crystal structure of a rna binding motif protein 39 (rbm39) from mus2 musculus at 0.95 a resolution Resolution 0.95 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.									.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure															.	.						.	.	.	.	.	.	.	.
Query SS confidence															.	.						.	.	.	.	.	.	.	.
Query Sequence		H	P	Q	R	G	C	E	V	F	V	G	K	I	.	.	P	R	D	V	Y	.	.	.	.	.	.	.	.	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E
Query Conservation															.	.						.	.	.	.	.	.	.	.
Alig confidence															.	.						.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																																						.	.	.
Template Sequence		Q	P	L	A	T	Q	C	F	Q	L	S	N	X	F	N	P	Q	T	E	E	E	V	G	W	D	T	E	I	K	D	D	V	I	E	E	C	N	K	H	G	G	V	I	H	I	Y	V	D	K	N	S	A	.	.	.	Q	G	N	V	Y	V	K	C	P	S	I	A	A	A	I	A	A	V	N	A	L	H	G	R	W
Template Known Secondary structure							S						S	S			G	G	G	G	G	S	T	T														T	T	T	T			S						T	T		S	.	.	.	S								S	S												T	T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470				.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	P	G	R	L	L	G	V	C	C
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		F	.	A	G	K	X	I	T	A	A	Y
Template Known Secondary structure			.	T	T
Template Predicted Secondary structure			.
Template SS confidence
		496		.	.	.	500	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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