Job Description A0AV96 Confidence 99.64% Date Fri May 25 09:48:37 BST 2012 Rank 182 Aligned Residues 80 % Identity 24% Template c3r27A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l; PDBTitle: crystal structure of the first rrm domain of heterogeneous nuclear2 ribonucleoprotein l (hnrnp l) Resolution 2.04 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	.	.	N	N	Y	E	I	R	P	G	R	L	L	G
Query Conservation																																																																				.	.
Alig confidence																																										.	.	.	.	.																						.	.							.
Template Conservation																																										.	.	.	.	.																														.
Template Sequence		K	T	P	A	S	P	V	V	H	I	R	G	L	I	D	G	V	V	E	A	D	L	V	E	A	L	Q	E	F	G	P	I	S	Y	V	V	V	M	P	K	.	.	.	.	.	K	R	Q	A	L	V	E	F	E	D	V	L	G	A	C	N	A	V	N	Y	A	A	D	N	Q	I	Y	I	A	.	G	H	P	A	F
Template Known Secondary structure							S						S			T	T											G	G	G	S									T	T	.	.	.	.	.	T	T							S	S														S					T	.	T
Template Predicted Secondary structure																																										.	.	.	.	.																														.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170
		144	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	C	S	V	D	N	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	Y	S	T	S	Q	K
Template Known Secondary structure						S		S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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