Job Description A0AV96 Confidence 99.78% Date Fri May 25 09:48:37 BST 2012 Rank 32 Aligned Residues 94 % Identity 26% Template c3pgwS_ PDB info PDB header:splicing/dna/rna Chain: S: PDB Molecule:u1-70k; PDBTitle: crystal structure of human u1 snrnp Resolution 4.40 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		W	D	P	H	N	D	P	N	A	Q	G	D	A	F	K	T	L	F	V	A	R	V	N	Y	D	T	T	E	S	K	L	R	R	E	F	E	V	Y	G	P	I	K	R	I	H	M	V	Y	S	K	R	S	G	K	P	R	G	Y	A	F	I	E	Y	E	H	E	R	D	M	H	S	A	Y	K	H	A	D	G	K	K
Template Known Secondary structure			S	G	G	G	T	T	S	S	S			S	S										S	S														S		B									S	S		S	S									B	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	P	G	R	L	L	G	V	C	C	S	V	D	N	C
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		I	D	.	G	R	R	V	L	V	D	V	E	R	G	R	T
Template Known Secondary structure			T	.	T									S	S
Template Predicted Secondary structure				.
Template SS confidence
		169	170		.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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