Job Description A0AV96 Confidence 96.08% Date Fri May 25 09:48:37 BST 2012 Rank 224 Aligned Residues 64 % Identity 19% Template c3p3dA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nucleoporin 53; PDBTitle: crystal structure of the nup53 rrm domain from pichia guilliermondii Resolution 2.35 Å

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.										.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	V	R	N	L	M	I	E	T	T	E	D	T	I	K	K	S	F	G	Q	F	N	P	G	C	V	E	R	.	.	.	.	.	.	.	.	.	V	K	K	I	R	D	Y	A	F	V	H	F	T	S	R	E	D	A	V	H	A	M	N	N	L	N	G	T	E	L	E	G	S	C	L	E	V
Query Conservation																															.	.	.	.	.	.	.	.	.
Alig confidence												.																			.	.	.	.	.	.	.	.	.																									.
Template Conservation												.																																																				.
Template Sequence		I	L	V	F	G	Y	P	E	T	M	.	A	N	Q	V	I	A	Y	F	Q	E	F	G	T	I	L	E	D	F	E	V	L	R	K	P	F	V	P	I	F	S	G	N	S	W	T	K	I	T	Y	D	N	P	A	S	A	V	D	A	L	L	E	.	N	G	A	V	F	N	G	V	L	L	G	V
Template Known Secondary structure									G	G	G	.									G	G	G	S		B		S			G	G	G											T	T						B	S	S									T	T	.	T	T				T	T
Template Predicted Secondary structure												.																																																				.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions