Job Description A0AV96 Confidence 99.65% Date Fri May 25 09:48:37 BST 2012 Rank 172 Aligned Residues 79 % Identity 20% Template c3ns5B_ PDB info PDB header:translation Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b; PDBTitle: crystal structure of the rna recognition motif of yeast eif3b residues2 76-161 Resolution 2.60 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																												.
Query SS confidence																.	.	.	.	.	.																												.
Query Sequence		H	P	Q	R	G	C	E	V	F	V	G	K	I	P	.	.	.	.	.	.	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P
Query Conservation																.	.	.	.	.	.																												.
Alig confidence																.	.	.	.	.	.																												.
Template Conservation
Template Sequence		P	L	G	S	D	Q	Y	I	V	V	N	G	A	P	V	I	P	S	A	K	V	P	V	L	K	K	A	L	T	S	L	F	S	K	A	G	K	V	V	N	M	E	F	P	I	D	E	A	T	G	K	T	K	G	F	L	F	V	E	C	G	S	M	N	D	A	K	K	I	I	K	S	F	H	G	K	R	L	D	L
Template Known Secondary structure					S	S							S					B	G	G	G													T	T	T	S											T	T	T	T				S							S	S												T	T		B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		139	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	L	L	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	H	R	L	F	L
Template Known Secondary structure		S		B
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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