Job Description A0AV96 Confidence 99.62% Date Fri May 25 09:48:37 BST 2012 Rank 189 Aligned Residues 71 % Identity 23% Template c3n9uI_ PDB info PDB header:splicing Chain: I: PDB Molecule:cleavage and polyadenylation specificity factor subunit 7; PDBTitle: crystal structure of the complex between the 25 kda subunit and the 592 kda subunit (rrm domain) of human cleavage factor im Resolution 1.92 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.											.
Query SS confidence																										.	.											.
Query Sequence		V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	.	.	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D
Query Conservation																										.	.											.
Alig confidence																										.	.											.													.	.	.	.	.														.
Template Conservation																																																			.	.	.	.	.														.
Template Sequence		V	Y	V	G	S	F	S	W	W	T	T	D	Q	Q	L	I	Q	V	I	R	S	I	G	V	Y	D	V	V	E	L	K	F	A	E	N	R	A	N	G	Q	S	K	G	Y	A	E	V	V	V	.	.	.	.	.	V	H	K	L	L	E	L	L	P	G	K	V	L	.	N	G	E	K	V	D	V	R	P	A	T	R
Template Known Secondary structure									T	T												T	T	T													T	T	T												.	.	.	.	.								S	T	T				.	T	T									S
Template Predicted Secondary structure																																																			.	.	.	.	.														.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions