Job Description A0AV96 Confidence 100.00% Date Fri May 25 09:48:37 BST 2012 Rank 2 Aligned Residues 252 % Identity 18% Template c3h2uD_ PDB info PDB header:cell adhesion Chain: D: PDB Molecule:raver-1; PDBTitle: human raver1 rrm1, rrm2, and rrm3 domains in complex with2 human vinculin tail domain vt Resolution 2.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V
Query Conservation
Alig confidence																													.							.	.	.	.	.																															.
Template Conservation																													.							.	.	.	.	.																															.
Template Sequence		N	R	R	K	I	L	I	R	G	L	P	G	D	V	T	N	Q	E	V	H	D	L	L	S	D	Y	E	.	L	K	Y	C	F	V	.	.	.	.	.	D	K	Y	K	G	T	A	F	V	T	L	L	N	G	E	Q	A	E	A	A	I	N	A	F	H	Q	S	R	L	R	.	E	R	E	L	S	V	Q	L	Q	P
Template Known Secondary structure													T	T										T	T	T	S		.		S					.	.	.	.	.		T	T	T	T							S	S												T	T				T	.	T
Template Predicted Secondary structure																													.							.	.	.	.	.																															.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	C	R	L	F	I	G	G	I	P	K	M	K	K	R	E	E	I	L	E	E	I	A	K	V	T	E	G	V	L	D	V	I	V	Y	A	S	A	A	D	K	M	K	N	R	G	F	A	F	V	E	Y	E	S	H	R	A	A	A	M	A	R	R	K	L	M	P	G	R	I	Q	L	W	G	H	Q	I	A	V
Query Conservation
Alig confidence																																										.	.																											.	.
Template Conservation																																										.	.																											.	.
Template Sequence		T	D	A	L	L	C	V	A	N	L	P	P	S	L	T	Q	Q	Q	F	E	E	L	V	R	P	F	G	S	L	E	R	C	F	L	V	Y	S	E	R	T	.	.	G	Q	S	K	G	Y	G	F	A	E	Y	M	K	K	D	S	A	A	R	A	K	S	D	L	L	G	.	.	K	P	L	G	P	R	T	L	Y	V
Template Known Secondary structure				S						S			T	T											G	G	G	S											T	T	T	.	.												S	S												T	T	.	.				T	T
Template Predicted Secondary structure																																										.	.																											.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		D	W	A	E	P	E	I	D	V	D	E	D	V	M	E	T	V	K	I	L	Y	V	R	N	L	M	I	E	T	T	E	D	T	I	K	K	S	F	G	Q	F	N	P	G	C	V	E	R	V	.	.	.	.	.	K	K	I	R	D	Y	A	F	V	H	F	T	S	R	E	D	A	V	H	A	M	N	N	L	N	G
Query Conservation																																																			.	.	.	.	.
Alig confidence							.																																												.	.	.	.	.
Template Conservation							.
Template Sequence		H	W	T	D	A	.	G	Q	L	T	P	A	L	L	H	S	R	C	L	C	V	D	R	L	P	P	G	F	N	D	V	D	A	L	C	R	A	L	S	A	V	H	S	P	T	F	C	Q	L	A	C	G	Q	D	G	Q	L	K	G	F	A	V	L	E	Y	E	T	A	E	M	A	E	E	A	Q	Q	Q	A	D	G
Template Known Secondary structure						S	.									S								S			T	T				S							T	T	S	S	S			S								T	T	S											S	S												T	T
Template Predicted Secondary structure							.
Template SS confidence
		206	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	L	E	G	S	C	L	E	V	T	L	A	K	P	V	D	K	E	Q	Y	S	R	Y	Q	K	A	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	L	G	G	S	H	L	R	V	S	F	C	A	P	G	P	P	G	R	S	M	L	A	A	L	I	A	A
Template Known Secondary structure					T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions