Job Description A0AV96 Confidence 99.76% Date Fri May 25 09:48:37 BST 2012 Rank 47 Aligned Residues 92 % Identity 18% Template c3egnA_ PDB info PDB header:splicing Chain: A: PDB Molecule:rna-binding protein 40; PDBTitle: c-terminal rna recognition motif of the u11/u12 65k protein Resolution 2.50 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																														.	.	.	.	.					.
Query SS confidence																																														.	.	.	.	.					.
Query Sequence		P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	.	.	.	.	.	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N
Query Conservation																																														.	.	.	.	.					.
Alig confidence																																														.	.	.	.	.					.
Template Conservation
Template Sequence		S	V	F	R	S	Y	E	P	G	E	P	N	C	R	I	Y	V	K	N	L	A	K	H	V	Q	E	K	D	L	K	Y	I	F	G	R	Y	V	D	F	S	S	E	T	Q	R	I	M	F	D	I	R	L	M	K	E	G	R	M	K	G	Q	A	F	I	G	L	P	N	E	K	A	A	A	K	A	L	K	E	A	N
Template Known Secondary structure		G	G	G	T	T					S			S									T	T											G	G	G			T	T																T	T	T									S	S												T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D	N	C
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		G	Y	V	L	F	.	G	K	P	M	V	V	Q	F	A	R	S	A	R
Template Known Secondary structure		T	B			T	.	T											S
Template Predicted Secondary structure							.
Template SS confidence
		488	.	490	.	.		.	.	.	.	.	.	.	500	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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