Job Description A0AV96 Confidence 98.01% Date Fri May 25 09:48:37 BST 2012 Rank 217 Aligned Residues 80 % Identity 19% Template c2wbrA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:gw182; PDBTitle: the rrm domain in gw182 proteins contributes to mirna-2 mediated gene silencing Resolution UNK

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	V	R	N	L	M	I	E	T	T	E	D	T	I	K	K	S	F	G	Q	F	N	P	G	C	V	E	R	V	K	K	I	R	D	Y	A	F	V	H	F	T	S	R	E	D	A	V	H	A	M	N	N	L	N	G	T	E	L	E	G	S	C	L	E	V	T	L	A	K	P	V	D	K	E	Q	Y	S	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	L	K	N	L	T	A	Q	I	D	G	P	T	L	R	T	L	C	M	Q	H	G	P	L	V	S	F	H	P	Y	L	N	Q	G	I	A	L	C	K	Y	T	T	R	E	E	A	N	K	A	Q	M	A	L	N	N	C	V	L	A	N	T	T	I	F	A	E	S	P	S	E	N	E	V	Q	S	I	M	Q	H
Template Known Secondary structure									T	T														S									T	T	T	T							S	S												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		1119	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions