Job Description A0AV96 Confidence 99.76% Date Fri May 25 09:48:37 BST 2012 Rank 58 Aligned Residues 80 % Identity 18% Template c2rs2A_ PDB info PDB header:rna binding protein/rna Chain: A: PDB Molecule:rna-binding protein musashi homolog 1; PDBTitle: 1h, 13c, and 15n chemical shift assignments for musashi1 rbd1:r(guagu)2 complex Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D
Query Conservation																																						.
Alig confidence																																						.																								.								.
Template Conservation																																																														.								.
Template Sequence		C	K	M	F	I	G	G	L	S	W	Q	T	T	Q	E	G	L	R	E	Y	F	G	Q	F	G	E	V	K	E	C	L	V	M	R	D	P	L	T	K	R	S	R	G	F	G	F	V	T	F	M	D	Q	A	G	V	D	K	V	L	A	.	Q	S	R	H	E	L	D	.	S	K	T	I	D	P	K	V	A	F	P
Template Known Secondary structure								S			T	T											T	T	T	S											T	T	T				T	T							S	S										.	S	S					T	.	T
Template Predicted Secondary structure																																																														.								.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.
		150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		98	.	100

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions