Job Description A0AV96 Confidence 99.73% Date Fri May 25 09:48:37 BST 2012 Rank 94 Aligned Residues 94 % Identity 26% Template c2la4A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: nmr structure of the c-terminal rrm domain of poly(u) binding 1 Resolution UNK

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		51	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		G	Q	R	K	Y	G	G	P	P	P	G	W	E	.	.	.	.	.	.	.	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		G	S	Q	T	I	G	L	P	P	Q	V	N	P	Q	A	V	D	H	I	I	R	S	A	P	P	R	V	T	T	A	Y	I	G	N	I	P	H	F	A	T	E	A	D	L	I	P	L	F	Q	N	F	G	F	I	L	D	F	K	H	Y	P	E	.	.	.	.	.	K	G	C	C	F	I	K	Y	D	T	H	E	Q
Template Known Secondary structure										S	S	S										T	T	S		S	S								S			T	T												T	T	S			S						T	T	.	.	.	.	.	T	T							S	S
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.						.	.	.	.	380	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D	N
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		A	A	V	C	I	V	A	L	A	N	F	P	F	Q	.	G	R	N	L	R	T	G	W	G	K	E	R
Template Known Secondary structure										T	T				T	.	T							B
Template Predicted Secondary structure																.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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