Job Description A0AV96 Confidence 99.82% Date Fri May 25 09:48:37 BST 2012 Rank 24 Aligned Residues 90 % Identity 23% Template c2kn4A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:immunoglobulin g-binding protein g, splicing factor; PDBTitle: the structure of the rrm domain of sc35 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P
Query Conservation																																																	.
Alig confidence																																																	.																																.
Template Conservation																																																																																	.
Template Sequence		H	H	H	H	H	M	D	V	E	G	M	T	S	L	K	V	D	N	L	T	Y	R	T	S	P	D	T	L	R	R	V	F	E	K	Y	G	R	V	G	D	V	Y	I	P	R	D	R	Y	T	K	E	S	R	G	F	A	F	V	R	F	H	D	K	R	D	A	E	D	A	M	D	A	M	D	G	A	V	L	D	.
Template Known Secondary structure			S	S							B								S			T	T														S											S	S		T	T	S									S	B											S	T	T			S	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	L	L	G	V	C	C	S	V	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	E	L	R	V	Q	M	A	R	Y	G
Template Known Secondary structure		S	S										S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions