Job Description A0AV96 Confidence 99.78% Date Fri May 25 09:48:37 BST 2012 Rank 36 Aligned Residues 114 % Identity 22% Template c2jwnB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:embryonic polyadenylate-binding protein 2-b; PDBTitle: solution nmr structure of the protease-resistent domain of2 xenopus laevis epabp2 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		L	L	A	L	M	E	R	T	G	Y	S	M	V	Q	E	N	G	Q	R	K	Y	G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y
Query Conservation																																																																										.
Alig confidence																																																																										.
Template Conservation
Template Sequence		A	I	A	P	C	M	Q	T	T	H	S	K	M	T	A	G	A	Y	T	E	G	P	P	Q	P	L	S	A	E	E	K	K	E	I	D	K	R	S	V	Y	V	G	N	V	D	Y	G	S	T	A	Q	D	L	E	A	H	F	S	S	C	G	S	I	N	R	I	T	I	L	C	D	K	F	S	G	H	P	K	G	Y
Template Known Secondary structure					S	S										B	T	T	T	B			S	S														T									T	T												T	T	S												T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D	N
Query Conservation
Alig confidence																		.								.
Template Conservation																		.								.
Template Sequence		A	Y	I	E	F	A	E	R	N	S	V	D	A	A	V	A	.	M	D	E	T	V	F	R	.	G	R	T	I	K	V	L	P	K	R	T	N
Template Known Secondary structure							S	S									T	.	T	S	S				T	.	T
Template Predicted Secondary structure																		.								.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions