Job Description A0AV96 Confidence 99.77% Date Fri May 25 09:48:37 BST 2012 Rank 46 Aligned Residues 87 % Identity 26% Template c2fy1A_ PDB info PDB header:structural protein/rna Chain: A: PDB Molecule:rna-binding motif protein, y chromosome, family PDBTitle: a dual mode of rna recognition by the rbmy protein Resolution UNK

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		M	V	E	A	D	H	P	G	K	L	F	I	G	G	L	N	R	E	T	N	E	K	M	L	K	A	V	F	G	K	H	G	P	I	S	E	V	L	L	I	K	D	R	T	S	K	S	R	G	F	A	F	I	T	F	E	N	P	A	D	A	K	N	A	A	K	D	M	N	G	K	S	L	H	.	G	K	A	I	K
Template Known Secondary structure				T	T		S										T	T	T												T	S	S			S							S	T	T	T	T										S	S												S	S		B		S	.	S	S	B
Template Predicted Secondary structure																																																																												.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.
		144	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	C	S	V	D	N	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	Q	A	K	K	P	S
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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