Job Description A0AV96 Confidence 99.73% Date Fri May 25 09:48:37 BST 2012 Rank 87 Aligned Residues 93 % Identity 22% Template c2fc8A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:ncl protein; PDBTitle: solution structure of the rrm_1 domain of ncl protein Resolution UNK

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y
Query Conservation																																																					.
Alig confidence																																										.	.	.									.
Template Conservation																																										.	.	.
Template Sequence		G	S	S	G	S	S	G	P	N	A	R	S	Q	P	S	K	T	L	F	V	K	G	L	S	E	D	T	T	E	E	T	L	K	E	S	F	D	G	S	V	.	.	.	R	A	R	I	V	T	D	R	E	T	G	S	S	K	G	F	G	F	V	D	F	N	S	E	E	D	A	K	A	A	K	E	A	M	E	D	G
Template Known Secondary structure								T	T	S	S	S	S				S	S								T	T									T	S	T	T		S	.	.	.								S	S	S		S										S	S												T	T
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	R	P	G	R	L	L	G	V	C	C	S	V	D	N	C	R
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		E	I	D	.	G	N	K	V	T	L	D	W	A	K	P	K	G	E
Template Known Secondary structure				T	.	T													S
Template Predicted Secondary structure					.
Template SS confidence
		78	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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