Job Description A0AV96 Confidence 99.69% Date Fri May 25 09:48:37 BST 2012 Rank 142 Aligned Residues 96 % Identity 17% Template c2e5iA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l-like; PDBTitle: solution structure of rna binding domain 2 in heterogeneous2 nuclear ribonucleoprotein l-like Resolution UNK

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	K	Y	G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L
Query Conservation
Alig confidence																																																									.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		G	K	R	I	T	R	P	G	N	T	D	D	P	S	G	G	N	K	V	L	L	L	S	I	Q	N	P	L	Y	P	I	T	V	D	V	L	Y	T	V	C	N	P	V	G	K	V	Q	R	I	V	I	F	K	R	N	.	.	.	.	G	I	Q	A	M	V	E	F	E	S	V	L	C	A	Q	K	A	K	A	A	L
Template Known Secondary structure								S											S								S			S												T	T	T	S										S	S	.	.	.	.	S								S	S
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		132	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		N	N	Y	E	I	R	P	G	.	R	L	L	G	V	C	C	S	V	D	N	C
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		N	G	A	D	I	Y	A	G	C	C	T	L	K	I	E	Y	A	R	P	T	R
Template Known Secondary structure		T	T				B	T	T	B	S								S		S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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