Job Description A0AV96 Confidence 99.77% Date Fri May 25 09:48:37 BST 2012 Rank 42 Aligned Residues 92 % Identity 20% Template c2e44A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:insulin-like growth factor 2 mrna binding PDBTitle: solution structure of rna binding domain in insulin-like2 growth factor 2 mrna binding protein 3 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E
Query Conservation
Alig confidence																																																		.	.
Template Conservation																																																		.	.
Template Sequence		G	S	S	G	S	S	G	S	V	P	K	R	Q	R	I	R	K	L	Q	I	R	N	I	P	P	H	L	Q	W	E	V	L	D	S	L	L	V	Q	Y	G	V	V	E	S	C	E	Q	V	.	.	N	T	D	S	E	T	A	V	V	N	V	T	Y	S	S	K	D	Q	A	R	Q	A	L	D	K	L	N	G	F	Q
Template Known Secondary structure								S							S											S	S	S													S									.	.			S	S	S	S								S	S												T	T		B
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	P	G	R	L	L	G	V	C	C	S	V	D	N
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		L	E	.	N	F	T	L	K	V	A	Y	I	P	D	E
Template Known Secondary structure			S	.	S		B
Template Predicted Secondary structure				.
Template SS confidence
		144	.		.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions