Job Description A0AV96 Confidence 99.77% Date Fri May 25 09:48:37 BST 2012 Rank 39 Aligned Residues 95 % Identity 23% Template c2do4A_ PDB info PDB header:immune system Chain: A: PDB Molecule:squamous cell carcinoma antigen recognized by t- PDBTitle: solution structure of the rna binding domain of squamous2 cell carcinoma antigen recognized by t cells 3 Resolution UNK

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	S	G	V	F	R	Y	S	T	S	L	E	K	H	K	L	F	I	S	G	L	P	F	S	C	T	K	E	E	L	E	E	I	C	K	A	H	G	T	V	K	D	L	R	L	V	T	N	R	A	G	K	P	K	G	L	A	Y	V	E	Y	E	N	E	S	Q	A	S	Q	A	V	M	K	M	D	G	M	T	I
Template Known Secondary structure				S	S					S	S					S						S			T	T											T	T	T	S											T	T	S											S	S												T	T			S
Template Predicted Secondary structure
Template SS confidence
		787	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	G	R	L	L	G	V	C	C	S	V	D	N	C	R
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		K	.	E	N	I	I	K	V	A	I	S	N	S	G	P	S
Template Known Secondary structure		S	.	S												S
Template Predicted Secondary structure			.
Template SS confidence
		867		.	.	870	.	.	.	.	.	.	.	.	.	880	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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