Job Description A0AV96 Confidence 99.80% Date Fri May 25 09:48:37 BST 2012 Rank 28 Aligned Residues 94 % Identity 24% Template c2do0A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the rna binding domain of2 heterogeneous nuclear ribonucleoprotein m Resolution UNK

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	S	G	S	S	G	A	L	Q	A	G	R	L	G	S	T	V	F	V	A	N	L	D	Y	K	V	G	W	K	K	L	K	E	V	F	S	M	A	G	V	V	V	R	A	D	I	L	E	D	K	D	G	K	S	R	G	I	G	T	V	T	F	E	Q	S	I	E	A	V	Q	A	I	S	M	F	N	G	Q	L
Template Known Secondary structure																	S						S			T	T											T	T	T	S											T	T		S										S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	P	G	R	L	L	G	V	C	C	S	V	D	N
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		L	F	.	D	R	P	M	H	V	K	M	D	E	R	A
Template Known Secondary structure			T	.	T									S
Template Predicted Secondary structure				.
Template SS confidence
		268	.		270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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