Job Description A0AV96 Confidence 99.76% Date Fri May 25 09:48:37 BST 2012 Rank 53 Aligned Residues 85 % Identity 29% Template c2dnzA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:probable rna-binding protein 23; PDBTitle: solution structure of the second rna binding domain of rna2 binding motif protein 23 Resolution UNK

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C
Query Conservation																																										.
Alig confidence																																										.																																.
Template Conservation																																																																										.
Template Sequence		S	S	G	S	S	G	L	Y	V	G	S	L	H	F	N	I	T	E	D	M	L	R	G	I	F	E	P	F	G	K	I	D	N	I	V	L	M	K	D	S	D	T	G	R	S	K	G	Y	G	F	I	T	F	S	D	S	E	C	A	R	R	A	L	E	Q	L	N	G	F	E	L	A	.	G	R	P	M	R	V	G
Template Known Secondary structure			S									S			T	T											T	T	T	S											S	S	S					S							S													T	T			S	S	.	S	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.
		146	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	V	D	N	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	T	E	R	L	D
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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