Job Description A0AV96 Confidence 99.41% Date Fri May 25 09:48:37 BST 2012 Rank 211 Aligned Residues 90 % Identity 18% Template c2dnyA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:fuse-binding protein-interacting repressor, PDBTitle: solution structure of the third rna binding domain of fbp-2 interacting repressor, siahbp1 Resolution UNK

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																									.	.						.	.	.																									.	.	.	.	.
Query SS confidence																									.	.						.	.	.																									.	.	.	.	.
Query Sequence		G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	.	.	P	R	D	V	Y	.	.	.	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	.	.	.	.	.	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K
Query Conservation																									.	.						.	.	.																									.	.	.	.	.
Alig confidence																									.	.						.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		G	S	S	G	S	S	G	K	L	L	R	K	Q	E	S	T	V	M	V	L	R	N	M	V	D	P	K	D	I	D	D	D	L	E	G	E	V	T	E	E	C	G	K	F	G	A	V	N	R	V	I	I	Y	Q	E	K	Q	G	E	E	E	D	A	E	I	I	V	K	I	F	V	E	F	S	I	A	S	E	T	H
Template Known Secondary structure				S		S	S				S												S	S	S		T	T	T														T	T	T	S														S	S	T	T												S	S
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		K	A	I	Q	A	L	N	G	R	W	F	.	A	G	R	K	V	V	A	E	V
Template Known Secondary structure								T	T				.	T	T
Template Predicted Secondary structure													.
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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