Job Description A0AV96 Confidence 96.39% Date Fri May 25 09:48:37 BST 2012 Rank 222 Aligned Residues 57 % Identity 21% Template c2dnrA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:synaptojanin-1; PDBTitle: solution structure of rna binding domain in synaptojanin 1 Resolution UNK

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V	D	N
Query Conservation
Alig confidence																					.	.	.	.	.	.	.																				.								.
Template Conservation																					.	.	.	.	.	.	.																				.								.
Template Sequence		D	E	L	L	Q	Q	F	A	S	F	G	E	V	I	L	I	R	F	V	.	.	.	.	.	.	.	E	D	K	M	W	V	T	F	L	E	G	S	S	A	L	N	V	L	S	.	L	N	G	K	E	L	L	.	N	R	T	I	T	I	A	L	K	S	P	S
Template Known Secondary structure										T	T										.	.	.	.	.	.	.	S	S	S						S	S							G	G	G	.	G	T	T				T	.	T											S
Template Predicted Secondary structure																					.	.	.	.	.	.	.																				.								.
Template SS confidence
		915	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.								.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.		.	.	.	.	.	.	.		960	.	.	.	.	.	.	.	.	.	970	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions