Job Description A0AV96 Confidence 99.70% Date Fri May 25 09:48:37 BST 2012 Rank 123 Aligned Residues 82 % Identity 27% Template c2dnqA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein 4b; PDBTitle: solution structure of rna binding domain 1 in rna-binding2 protein 30 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

63

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70

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80

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90

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100

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110

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120

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130

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140

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Predicted Secondary structure

Query SS confidence

Query Sequence

E

G

P

H

P

Q

R

G

C

E

V

F

V

G

K

I

P

R

D

V

Y

E

D

E

L

V

P

V

F

E

A

V

G

R

I

Y

E

L

R

L

M

M

D

F

D

G

K

N

R

G

Y

A

F

V

M

Y

C

H

K

H

E

A

K

R

A

V

R

E

L

N

N

Y

E

I

R

P

G

R

L

L

Query Conservation

Alig confidence

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Template Conservation

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Template Sequence

G

S

S

G

S

S

G

M

V

K

L

F

I

G

N

L

P

R

E

A

T

E

Q

E

I

R

S

L

F

E

Q

Y

G

K

V

L

E

C

D

I

I

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K

N

Y

G

F

V

H

I

E

D

K

T

A

A

E

D

A

I

R

N

L

H

H

Y

K

L

H

.

G

V

N

I

Template Known Secondary structure

S

S

S

S

S

S

T

S

S

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T

T

S

S

T

T

B

S

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S

B

Template Predicted Secondary structure

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Template SS confidence

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions