Job Description A0AV96 Confidence 99.70% Date Fri May 25 09:48:37 BST 2012 Rank 120 Aligned Residues 90 % Identity 20% Template c2dnnA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein 12; PDBTitle: solution structure of rna binding domain in rna-binding2 protein 12 Resolution UNK

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	P	P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E
Query Conservation
Alig confidence																																										.																																		.
Template Conservation																																										.																																		.
Template Sequence		S	S	G	S	S	G	K	P	L	P	I	N	P	D	D	L	Y	V	S	V	H	G	M	P	F	S	A	M	E	N	D	V	R	D	F	F	H	G	L	R	.	V	D	A	V	H	L	L	K	D	H	V	G	R	N	N	G	N	G	L	V	K	F	L	S	P	Q	D	T	F	E	A	L	K	.	R	N	R	M	L
Template Known Secondary structure																										S	S										T	T	T	S		.										T	T					S							S	S										.	T	T	T
Template Predicted Secondary structure																																										.																																		.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	P	G	R	L	L	G	V	C	C	S	V
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		M	I	.	Q	R	Y	V	E	V	S	P	A	T
Template Known Secondary structure			T	.	T
Template Predicted Secondary structure				.
Template SS confidence
		297	.		.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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