Job Description A0AV96 Confidence 99.74% Date Fri May 25 09:48:37 BST 2012 Rank 78 Aligned Residues 86 % Identity 15% Template c2divA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:trna selenocysteine associated protein; PDBTitle: solution structure of the rrm domain of trna selenocysteine2 associated protein Resolution UNK

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.												.																																		.	.	.
Query SS confidence																																	.												.																																		.	.	.
Query Sequence		P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	.	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	.	.	.
Query Conservation																																	.												.																																		.	.	.
Alig confidence																																	.												.																																.		.	.	.
Template Conservation																																																																													.
Template Sequence		G	S	S	G	M	A	A	S	L	W	M	G	D	L	E	P	Y	M	D	E	N	F	I	S	R	A	F	A	T	M	G	E	T	V	M	S	V	K	I	I	R	N	R	L	T	G	I	P	A	G	Y	C	F	V	E	F	A	D	L	A	T	A	E	K	C	L	H	K	I	N	G	K	P	L	P	.	G	A	T	P
Template Known Secondary structure					S	S	S	S						S			T	T													T	T												S	S	S												S											T	T	T	T	S			S	.	S		S	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.
			140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	L	L	G	V	C	C	S	V	D	N	C
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	K	R	F	K	L	N	Y	A	T	Y	S	G
Template Known Secondary structure										T	T			S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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