Job Description A0AV96 Confidence 99.71% Date Fri May 25 09:48:37 BST 2012 Rank 113 Aligned Residues 84 % Identity 24% Template c2dh9A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m Resolution UNK

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C
Query Conservation
Alig confidence																																									.																																.
Template Conservation																																									.																																.
Template Sequence		S	S	G	S	S	G	I	F	V	R	N	L	P	F	D	F	T	W	K	M	L	K	D	K	F	N	E	C	G	H	V	L	Y	A	D	I	K	M	E	.	N	G	K	S	K	G	C	G	V	V	K	F	E	S	P	E	V	A	E	R	A	C	R	M	M	N	G	M	K	L	S	.	G	R	E	I	D	V	R	I
Template Known Secondary structure			S									S			T	T												T	T	S											.	T	T				S							S	S											T	T	T			T	T	.	S
Template Predicted Secondary structure																																									.																																.
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.		.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.
		147	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	N	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	N	A	S	G
Template Known Secondary structure			T	T		S
Template Predicted Secondary structure
Template SS confidence
		612	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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