Job Description A0AV96 Confidence 99.74% Date Fri May 25 09:48:37 BST 2012 Rank 82 Aligned Residues 84 % Identity 30% Template c2dgtA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein 30; PDBTitle: solution structure of the second rna binding domain in rna-2 binding protein 30 Resolution UNK

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.																												.
Template Conservation																																													.	.	.	.	.	.	.																												.
Template Sequence		G	S	S	G	S	S	G	K	A	S	T	K	L	H	V	G	N	I	S	P	T	C	T	N	Q	E	L	R	A	K	F	E	E	Y	G	P	V	I	E	C	D	I	V	.	.	.	.	.	.	.	K	D	Y	A	F	V	H	M	E	R	A	E	D	A	V	E	A	I	R	G	L	D	N	T	E	F	Q	.	G	K
Template Known Secondary structure					S					S	S							S			S	S												T	T	S									.	.	.	.	.	.	.	S	S							S													T	T				T	.	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.																												.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.
		141	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	V	C	C	S	V	D	N	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	H	V	Q	L	S	T	S	R	L	R
Template Known Secondary structure								S	S				S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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