Job Description A0AV96 Confidence 99.66% Date Fri May 25 09:48:37 BST 2012 Rank 165 Aligned Residues 92 % Identity 17% Template c2db1A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein f; PDBTitle: solution structure of the rna binding domain in2 heterogeneous nuclear ribonucleoprotein f homolog Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

55

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60

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70

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80

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90

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100

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110

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120

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130

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Predicted Secondary structure

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Query SS confidence

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Query Sequence

Y

G

G

P

P

P

G

W

E

G

P

H

P

Q

R

G

C

E

V

F

V

G

K

I

P

R

D

V

Y

E

D

E

L

V

P

V

F

E

A

V

G

R

I

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.

Y

E

L

R

L

M

M

D

F

D

G

K

N

R

G

Y

A

F

V

M

Y

C

H

K

H

E

A

K

R

A

V

R

E

L

Query Conservation

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Alig confidence

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Template Conservation

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Template Sequence

S

S

G

S

S

G

M

M

L

G

P

E

G

G

E

G

Y

V

V

K

L

R

G

L

P

W

S

C

S

I

E

D

V

Q

N

F

L

S

D

C

T

I

H

D

G

V

A

G

V

H

F

I

Y

T

R

E

G

R

Q

S

G

E

A

F

V

E

L

E

S

E

D

D

V

K

L

A

L

K

.

K

Template Known Secondary structure

S

B

S

S

S

B

S

T

T

T

T

T

S

B

T

T

G

G

G

G

S

S

S

B

S

S

G

G

.

G

Template Predicted Secondary structure

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Template SS confidence

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions