Job Description A0AV96 Confidence 99.72% Date Fri May 25 09:48:37 BST 2012 Rank 108 Aligned Residues 84 % Identity 18% Template c2adbA_ PDB info PDB header:rna binding protein/rna Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1; PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd2 complexed with cucucu rna Resolution UNK

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	.	P	G	R	L	L	G
Query Conservation																																																																											.
Alig confidence																																													.	.	.																												.
Template Conservation																																													.	.	.
Template Sequence		A	G	Q	S	P	V	L	R	I	I	V	E	N	L	F	Y	P	V	T	L	D	V	L	H	Q	I	F	S	K	F	G	T	V	L	K	I	I	T	F	T	K	N	N	.	.	.	Q	F	Q	A	L	L	Q	Y	A	D	P	V	S	A	Q	H	A	K	L	S	L	D	G	Q	N	I	Y	N	A	C	C	T	L	R
Template Known Secondary structure												S		S			S	T	T										T	T	T	S											T	T	.	.	.									S														S			S	S	T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		144	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	C	S	V	D	N	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	F	S	K	L	T	S
Template Known Secondary structure						S	S		S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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