Job Description A0AV96 Confidence 99.70% Date Fri May 25 09:48:37 BST 2012 Rank 127 Aligned Residues 91 % Identity 22% Template c2a3jA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:u1 small nuclear ribonucleoprotein a; PDBTitle: structure of urndesign, a complete computational redesign2 of human u1a protein Resolution UNK

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	.	.	.	.	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.																	.	.																																	.
Template Conservation																																														.	.																																	.
Template Sequence		P	P	H	T	E	P	S	Q	V	V	L	I	T	N	I	N	P	E	V	P	K	E	K	L	Q	A	L	L	Y	A	L	A	S	S	Q	G	D	I	L	D	I	V	V	D	.	.	L	S	D	D	N	S	G	K	A	Y	I	V	F	A	T	Q	E	S	A	Q	A	F	V	E	A	F	Q	G	Y	P	F	Q	.	G
Template Known Secondary structure						S			S						S			T	T	S																	S									.	.				S	S									S	S											S	T	T				T	.	T
Template Predicted Secondary structure																																														.	.																																	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	G	V	C	C	S	V	D	N	C	R	L	F	I	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	L	V	I	T	F	S	E	T	P	Q	S	Q	V	A	E	D
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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