Job Description A0AV96 Confidence 99.42% Date Fri May 25 09:48:37 BST 2012 Rank 210 Aligned Residues 78 % Identity 19% Template c1wwhB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:nucleoporin 35; PDBTitle: crystal structure of the mppn domain of mouse nup35 Resolution 2.70 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S	V
Query Conservation
Alig confidence																	.																			.	.	.	.	.																							.
Template Conservation																	.																			.	.	.	.	.																							.
Template Sequence		D	D	T	W	V	T	V	F	G	F	P	Q	A	S	A	.	S	Y	I	L	L	Q	F	A	Q	Y	G	N	I	L	K	H	V	M	.	.	.	.	.	S	N	T	G	N	W	M	H	I	R	Y	Q	S	K	L	Q	A	R	K	A	L	S	.	K	D	G	R	I	F	G	E	S	I	M	I	G	V	K	P	C	I
Template Known Secondary structure			T	T									G	G	G		.									T	T	S			S					.	.	.	.	.		S	S		S							S	S									T	.	T	T	T				T	T	T
Template Predicted Secondary structure																	.																			.	.	.	.	.																							.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		149	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	C	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	N	V	M
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions